Matches in Nanopublications for { ?s <http://schema.org/name> ?o ?g. }
- a5812e02-c6e1-4bf0-a13f-9fad72c73f79 name "join_infernal_and_BLASTcmd_results.R" assertion.
- af1cd576-0d29-4f18-be29-84e5ec3ccd82 name "entrez_env.yaml" assertion.
- af1cd576-0d29-4f18-be29-84e5ec3ccd82 name "entrez_env.yaml" assertion.
- b5c49c93-d1ad-4601-80c4-70277c4fd400 name "r_tidyverse_env.yaml" assertion.
- b5c49c93-d1ad-4601-80c4-70277c4fd400 name "r_tidyverse_env.yaml" assertion.
- bf376d44-9a16-4535-92b1-4b66ad2a519a name "cmdBLAST_to_R_env.yaml" assertion.
- bf376d44-9a16-4535-92b1-4b66ad2a519a name "cmdBLAST_to_R_env.yaml" assertion.
- c119db00-a9bb-469c-8aef-97d2927ad412 name "cmdBLAST.sh" assertion.
- c119db00-a9bb-469c-8aef-97d2927ad412 name "cmdBLAST.sh" assertion.
- d642e7aa-836b-4808-a6a7-65043f69a119 name "Hits_distribution_heatmap.png" assertion.
- d642e7aa-836b-4808-a6a7-65043f69a119 name "Hits_distribution_heatmap.png" assertion.
- d7c7b947-a603-404d-bbba-42138827e166 name "summary_table_models.xlsx" assertion.
- d7c7b947-a603-404d-bbba-42138827e166 name "summary_table_models.xlsx" assertion.
- f985439a-75a1-4c88-9d85-c49b1bf41a9f name "make_table_plots.R" assertion.
- f985439a-75a1-4c88-9d85-c49b1bf41a9f name "make_table_plots.R" assertion.
- 8ac41430-786a-430f-abe4-37d599cdae43 name "search" assertion.
- 8ac41430-786a-430f-abe4-37d599cdae43 name "search" assertion.
- 8cff22b7-ba04-4331-9c66-9839b47eaa32 name "database' folder" assertion.
- 8cff22b7-ba04-4331-9c66-9839b47eaa32 name "database' folder" assertion.
- 935b0973-3d62-49ac-9c5a-84cc5b147c8b name "ribonucleic acid" assertion.
- 935b0973-3d62-49ac-9c5a-84cc5b147c8b name "ribonucleic acid" assertion.
- 9d5f1beb-ded6-4482-9c66-179de5feff0b name "username" assertion.
- 9d5f1beb-ded6-4482-9c66-179de5feff0b name "username" assertion.
- 9e31b1dd-d3ba-4d69-ad80-5549179acdc5 name "username" assertion.
- 9e31b1dd-d3ba-4d69-ad80-5549179acdc5 name "username" assertion.
- a028a5da-e9aa-4ae3-b2d4-0ffaa42903f5 name "covariance" assertion.
- a028a5da-e9aa-4ae3-b2d4-0ffaa42903f5 name "covariance" assertion.
- a15f9eff-f256-4663-87fd-6ab855cd5941 name "software" assertion.
- a15f9eff-f256-4663-87fd-6ab855cd5941 name "software" assertion.
- a20d1313-4ed3-40e3-b3a2-410652e82081 name "The software" assertion.
- a20d1313-4ed3-40e3-b3a2-410652e82081 name "The software" assertion.
- a48c1ce5-f60b-461b-b1a9-249075c973e8 name "file" assertion.
- a48c1ce5-f60b-461b-b1a9-249075c973e8 name "file" assertion.
- a5ffdb9a-54c2-4a38-946c-77190ed34431 name "database query" assertion.
- a5ffdb9a-54c2-4a38-946c-77190ed34431 name "database query" assertion.
- acf35671-dadd-4cf7-9241-ed095c2c7de3 name "directory" assertion.
- acf35671-dadd-4cf7-9241-ed095c2c7de3 name "directory" assertion.
- ad9304c3-ccf5-4d0f-8ca0-9f4da0cab28e name "genetics" assertion.
- ad9304c3-ccf5-4d0f-8ca0-9f4da0cab28e name "genetics" assertion.
- af381567-5178-4371-a371-df7607665fc5 name "throughput" assertion.
- af381567-5178-4371-a371-df7607665fc5 name "throughput" assertion.
- b0a6cec6-4527-4450-8012-5fa257d2ab77 name "homology search" assertion.
- b0a6cec6-4527-4450-8012-5fa257d2ab77 name "homology search" assertion.
- b0e0a997-66e3-4631-ae36-b0b54cdee3d9 name "folder" assertion.
- b0e0a997-66e3-4631-ae36-b0b54cdee3d9 name "folder" assertion.
- b1d6ebd1-ab77-4337-b253-7b08f406c27e name "permission notice" assertion.
- b1d6ebd1-ab77-4337-b253-7b08f406c27e name "permission notice" assertion.
- b591df3e-7def-4e90-a20b-28fcbbff4fc2 name "GERONIMO tool" assertion.
- b591df3e-7def-4e90-a20b-28fcbbff4fc2 name "GERONIMO tool" assertion.
- ba2815fb-b1e0-4bd6-8934-8040df63fe9f name "pipeline" assertion.
- ba2815fb-b1e0-4bd6-8934-8040df63fe9f name "pipeline" assertion.
- bb5ac70a-e6aa-4213-95d8-a7cf4b58f3f6 name "folder" assertion.
- bb5ac70a-e6aa-4213-95d8-a7cf4b58f3f6 name "folder" assertion.
- c32b7cb6-cdf9-45f8-9acd-64e8609d64f0 name "GERONIMO" assertion.
- c32b7cb6-cdf9-45f8-9acd-64e8609d64f0 name "GERONIMO" assertion.
- c45ec5d3-c9ab-43ac-857d-f1acd9382c63 name "homology" assertion.
- c45ec5d3-c9ab-43ac-857d-f1acd9382c63 name "homology" assertion.
- c6632496-4497-4e92-869f-1072a707de02 name "However, please note that deleting this folder will require the reinstallation of GERONIMO dependencies when the analysis is rerun." assertion.
- c6632496-4497-4e92-869f-1072a707de02 name "However, please note that deleting this folder will require the reinstallation of GERONIMO dependencies when the analysis is rerun." assertion.
- c86349a6-01f9-4c71-a872-ce3527630004 name "file explorer" assertion.
- c86349a6-01f9-4c71-a872-ce3527630004 name "file explorer" assertion.
- c88a7dc6-d3d4-43a4-9de6-b0d62237c95f name "genome" assertion.
- c88a7dc6-d3d4-43a4-9de6-b0d62237c95f name "genome" assertion.
- cceabc2e-5232-4060-8697-5fcaa87b6f18 name "computer programming and software" assertion.
- cceabc2e-5232-4060-8697-5fcaa87b6f18 name "computer programming and software" assertion.
- cde37df3-f892-4c6e-89a0-f8b532fde95d name "Rfam database" assertion.
- cde37df3-f892-4c6e-89a0-f8b532fde95d name "Rfam database" assertion.
- d2685e00-63e1-4365-b375-92539c6893ec name "Detect RNA sequence" assertion.
- d2685e00-63e1-4365-b375-92539c6893ec name "Detect RNA sequence" assertion.
- d4da8bc8-008c-4385-9640-9bed35f86494 name "earth sciences" assertion.
- d4da8bc8-008c-4385-9640-9bed35f86494 name "earth sciences" assertion.
- d548f2ff-c42c-4cba-b8fe-feee2ff0fb11 name "taxonomy" assertion.
- d548f2ff-c42c-4cba-b8fe-feee2ff0fb11 name "taxonomy" assertion.
- d9478a50-7977-42f2-afc6-f9f5016caa29 name "search" assertion.
- d9478a50-7977-42f2-afc6-f9f5016caa29 name "search" assertion.
- e4e53726-b83b-4025-ac62-990609bc13db name "name" assertion.
- e4e53726-b83b-4025-ac62-990609bc13db name "name" assertion.
- 0000-0003-3876-6581 name "Agata Kilar" assertion.
- 0000-0003-3876-6581 name "Agata Kilar" assertion.
- v1.0 name "Common Workflow Language" assertion.
- v1.0 name "Common Workflow Language" assertion.
- 522 name "Agata Kilar" assertion.
- 522 name "Agata Kilar" assertion.
- 178 name "Mendel Centre for Plant Genomics and Proteomics" assertion.
- 178 name "Mendel Centre for Plant Genomics and Proteomics" assertion.
- enrichment_service-account-enrichment name "service-account-enrichment" assertion.
- enrichment_service-account-enrichment name "service-account-enrichment" assertion.
- 0d2c2af7-0ab6-4218-885f-a838c95f4871 name "- Coverage bigWig files for each individual sample are produced using CPM values (i.e. Signal Per Million Reads, SPMR) - For all combinations of target and treatment coverage bigWig files are also produced, along with fold-enrichment bigWig files" assertion.
- 0d2c2af7-0ab6-4218-885f-a838c95f4871 name "- Coverage bigWig files for each individual sample are produced using CPM values (i.e. Signal Per Million Reads, SPMR) - For all combinations of target and treatment coverage bigWig files are also produced, along with fold-enrichment bigWig files" assertion.
- 0f19c8c2-dbdb-4207-b24c-c97de87452ac name "geology" assertion.
- 0f19c8c2-dbdb-4207-b24c-c97de87452ac name "geology" assertion.
- 0fc5108a-3620-4c1b-94d3-a22e717bd424 name "### Outputs - Trimmed fastq.gz files will be written to `data/fastq/trimmed` - `FastQC` and `MultiQC` will also be run, with output in `docs/qc/trimmed` - AdapterRemoval 'settings' files will be written to `output/adapterremoval`" assertion.
- 0fc5108a-3620-4c1b-94d3-a22e717bd424 name "### Outputs - Trimmed fastq.gz files will be written to `data/fastq/trimmed` - `FastQC` and `MultiQC` will also be run, with output in `docs/qc/trimmed` - AdapterRemoval 'settings' files will be written to `output/adapterremoval`" assertion.
- 113a166f-2c22-4c99-a811-eb9943175d7b name "fastq.gz file" assertion.
- 113a166f-2c22-4c99-a811-eb9943175d7b name "fastq.gz file" assertion.
- 13a2600e-aeba-4334-9fd1-abb8f2542e75 name "### Outputs - Trimmed fastq.gz files will be written to `data/fastq/trimmed` - `FastQC` and `MultiQC` will also be run, with output in `docs/qc/trimmed` - AdapterRemoval 'settings' files will be written to `output/adapterremoval`" assertion.
- 13a2600e-aeba-4334-9fd1-abb8f2542e75 name "### Outputs - Trimmed fastq.gz files will be written to `data/fastq/trimmed` - `FastQC` and `MultiQC` will also be run, with output in `docs/qc/trimmed` - AdapterRemoval 'settings' files will be written to `output/adapterremoval`" assertion.
- 1efe80d0-1f70-4a71-8b23-3e1de8d01a44 name "log" assertion.
- 1efe80d0-1f70-4a71-8b23-3e1de8d01a44 name "log" assertion.
- 28fa92df-fcc2-479d-b1db-71bdf50be326 name "earth sciences" assertion.
