Matches in Nanopublications for { ?s ?p ?o <http://purl.org/np/RArAFrdM4rux7Cwl-lT_a4JzGk9tcGItbpd7ykkbD3S2M#assertion>. }
- molecular_activity_to_chemical_entity_association_object label "molecular activity to chemical entity association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- molecular_activity_has_output label "molecular activity has output - A chemical entity that is the output for the reaction" assertion.
- molecular_activity_has_input label "molecular activity has input - A chemical entity that is the input for the reaction" assertion.
- molecular_activity_enabled_by label "molecular activity enabled by - The gene product, gene, or complex that catalyzes the reaction" assertion.
- model_to_disease_association_mixin_subject label "model to disease association mixin subject - The entity that serves as the model of the disease. This may be an organism, a strain of organism, a genotype or variant that exhibits similar features, or a gene that when mutated exhibits features of the disease" assertion.
- model_to_disease_association_mixin_predicate label "model to disease association mixin predicate - The relationship to the disease" assertion.
- model_of label "model of - holds between a thing and some other thing it approximates for purposes of scientific study, in virtue of its exhibiting similar features of the studied entity." assertion.
- mesh_terms label "mesh terms - mesh terms tagging a publication" assertion.
- mentions label "mentions - refers to is a relation between one information content entity and the named thing that it makes reference to." assertion.
- mentioned_by label "mentioned by - refers to is a relation between one named thing and the information content entity that it makes reference to." assertion.
- member_of label "member of - Defines a mereological relation between a item and a collection." assertion.
- mechanism_of_action label "mechanism of action - a boolean flag to indicate if the edge is part of a path or subgraph of a knowledge graph that constitutes the mechanism of action for a result." assertion.
- max_tolerated_dose label "max tolerated dose - The highest dose of a drug or treatment that does not cause unacceptable side effects. The maximum tolerated dose is determined in clinical trials by testing increasing doses on different groups of people until the highest dose with acceptable side effects is found. Also called MTD." assertion.
- material_sample_to_entity_association_mixin_subject label "material sample to entity association mixin subject - the material sample being described" assertion.
- material_sample_derivation_association_subject label "material sample derivation association subject - the material sample being described" assertion.
- material_sample_derivation_association_predicate label "material sample derivation association predicate - derivation relationship" assertion.
- material_sample_derivation_association_object label "material sample derivation association object - the material entity the sample was derived from. This may be another material sample, or any other material entity, including for example an organism, a geographic feature, or some environmental material." assertion.
- mapped_predicate label "mapped predicate - The predicate that is being replaced by the fully qualified representation of predicate + subject and object qualifiers. Only to be used in test data and mapping data to help with the transition to the fully qualified predicate model. Not to be used in knowledge graphs." assertion.
- manifestation_of label "manifestation of - that part of a phenomenon which is directly observable or visibly expressed, or which gives evidence to the underlying process; used in SemMedDB for linking things like dysfunctions and processes to some disease or syndrome" assertion.
- macromolecular_machine_to_molecular_activity_association_object label "macromolecular machine to molecular activity association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- macromolecular_machine_to_entity_association_mixin_subject label "macromolecular machine to entity association mixin subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- macromolecular_machine_to_cellular_component_association_object label "macromolecular machine to cellular component association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- macromolecular_machine_to_biological_process_association_object label "macromolecular machine to biological process association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- macromolecular_machine_mixin_name label "macromolecular machine mixin name - genes are typically designated by a short symbol and a full name. We map the symbol to the default display name and use an additional slot for full name" assertion.
- longitude label "longitude - longitude" assertion.
- location_of label "location of - holds between material entity or site and a material entity that is located within it (but not considered a part of it)" assertion.
- located_in label "located in - holds between a material entity and a material entity or site within which it is located (but of which it is not considered a part)" assertion.
- ln_ratio_confidence_interval label "ln ratio confidence interval - The 99% confidence interval for the ln_ratio calculation (i.e. the range of values within which the true value has a 99% chance of falling)" assertion.
- ln_ratio label "ln ratio - the natural log of the ratio of co-occurrence to expected" assertion.
- likelihood_associated_with label "likelihood associated with - " assertion.
- latitude label "latitude - latitude" assertion.
- knowledge_source label "knowledge source - An Information Resource from which the knowledge expressed in an Association was retrieved, directly or indirectly. This can be any resource through which the knowledge passed on its way to its currently serialized form. In practice, implementers should use one of the more specific subtypes of this generic property." assertion.
- keywords label "keywords - keywords tagging a publication" assertion.
- issue label "issue - issue of a newspaper, a scientific journal or magazine for reference purpose" assertion.
- iso_abbreviation label "iso abbreviation - Standard abbreviation for periodicals in the International Organization for Standardization (ISO) 4 system See https://www.issn.org/services/online-services/access-to-the-ltwa/. If the 'published in' property is set, then the iso abbreviation pertains to the broader publication context (the journal) within which the given publication node is embedded, not the publication itself." assertion.
- is_toxic label "is toxic - " assertion.
- is_synonymous_variant_of label "is synonymous variant of - holds between a sequence variant and a gene, such the sequence variant is in the coding sequence of the gene, but results in the same amino acid sequence" assertion.
- is_supplement label "is supplement - " assertion.
- is_splice_site_variant_of label "is splice site variant of - holds between a sequence variant and a gene, such the sequence variant is in the canonical splice site of one of the gene's exons." assertion.
- is_sequence_variant_of label "is sequence variant of - holds between a sequence variant and a nucleic acid entity" assertion.
- is_nonsense_variant_of label "is nonsense variant of - holds between a sequence variant and a gene, such the sequence variant results in a premature stop codon" assertion.
- is_non_coding_variant_of label "is non coding variant of - holds between a sequence variant and a gene, where the variant does not affect the coding sequence" assertion.
- is_nearby_variant_of label "is nearby variant of - holds between a sequence variant and a gene sequence that the variant is genomically close to." assertion.
- is_missense_variant_of label "is missense variant of - holds between a gene and a sequence variant, such the sequence variant results in a different amino acid sequence but where the length is preserved." assertion.
- is_metabolite_of label "is metabolite of - holds between two molecular entities in which the first one is derived from the second one as a product of metabolism" assertion.
- is_metabolite label "is metabolite - indicates whether a molecular entity is a metabolite" assertion.
- is_frameshift_variant_of label "is frameshift variant of - holds between a sequence variant and a gene, such the sequence variant causes a disruption of the translational reading frame, because the number of nucleotides inserted or deleted is not a multiple of three." assertion.
- is_excipient_of label "is excipient of - holds between a molecular entity and a drug in which the former is a part of the latter, and is a biologically inactive component" assertion.
- is_active_ingredient_of label "is active ingredient of - holds between a molecular entity and a drug, in which the former is a part of the latter, and is a biologically active component" assertion.
- iri label "iri - An IRI for an entity. This is determined by the id using expansion rules." assertion.
- interbase_coordinate label "interbase coordinate - A position in interbase coordinates. Interbase coordinates start at position 0 instead of position 1. This is applied to a sequence localization edge." assertion.
- information_content_entity_to_named_thing_association_subject label "information content entity to named thing association subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- information_content_entity_to_named_thing_association_predicate label "information content entity to named thing association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- information_content_entity_to_named_thing_association_object label "information content entity to named thing association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- increases_response_to label "increases response to - holds between two chemical entities where the action or effect of one increases the susceptibility of a biological entity or system (e.g. an organism, cell, cellular component, macromolecular machine mixin, biological or pathological process) to the other" assertion.
- increases_amount_or_activity_of label "increases amount or activity of - A grouping mixin to help with searching for all the predicates that increase the amount or activity of the object." assertion.
- increased_likelihood_associated_with label "increased likelihood associated with - " assertion.
- in_taxon label "in taxon - connects an entity to its taxonomic classification. Only certain kinds of entities can be taxonomically classified; see 'thing with taxon'" assertion.
- in_pathway_with label "in pathway with - holds between two genes or gene products that are part of in the same biological pathway" assertion.
- in_linkage_disequilibrium_with label "in linkage disequilibrium with - holds between two sequence variants, the presence of which are correlated in a population" assertion.
- in_complex_with label "in complex with - holds between two genes or gene products that are part of (or code for products that are part of) in the same macromolecular complex" assertion.
- in_cell_population_with label "in cell population with - holds between two genes or gene products that are expressed in the same cell type or population" assertion.
- homologous_to label "homologous to - holds between two biological entities that have common evolutionary origin" assertion.
- highest_FDA_approval_status label "highest FDA approval status - Should be the highest level of FDA approval this chemical entity or device has, regardless of which disease, condition or phenotype it is currently being reviewed to treat. For specific levels of FDA approval for a specific condition, disease, phenotype, etc., see the association slot, 'FDA approval status.'" assertion.
- has_variant_part label "has variant part - holds between a nucleic acid entity and a nucleic acid entity that is a sub-component of it" assertion.
- has_unit label "has unit - connects a quantity value to a unit" assertion.
- has_total label "has total - total number of things in a particular reference set" assertion.
- has_topic label "has topic - Connects a node to a vocabulary term or ontology class that describes some aspect of the entity. In general specific characterization is preferred. See https://github.com/biolink/biolink-model/issues/238" assertion.
- has_supporting_study_result label "has supporting study result - connects an association to an instance of supporting study result" assertion.
- has_stressor label "has stressor - the process or entity that the receptor is being exposed to" assertion.
- has_side_effect label "has side effect - An unintended, but predictable, secondary effect shown to be correlated with a therapeutic agent, drug or treatment. Side effects happen at normal, recommended doses or treatments, and are unrelated to the intended purpose of the medication." assertion.
- has_sequence_location label "has sequence location - holds between two nucleic acid entities when the subject can be localized in sequence coordinates on the object. For example, between an exon and a chromosome/contig." assertion.
- has_route label "has route - the process that results in the stressor coming into direct contact with the receptor" assertion.
- has_receptor label "has receptor - the organism or organism part being exposed" assertion.
- has_quantitative_value label "has quantitative value - connects an attribute to a value" assertion.
- has_qualitative_value label "has qualitative value - connects an attribute to a value" assertion.
- has_procedure label "has procedure - connects an entity to one or more (medical) procedures" assertion.
- has_plasma_membrane_part label "has plasma membrane part - Holds between a cell c and a protein complex or protein p if and only if that cell has as part a plasma_membrane[GO:0005886], and that plasma membrane has p as part." assertion.
- has_percentage label "has percentage - equivalent to has quotient multiplied by 100" assertion.
- has_participant label "has participant - holds between a process and a continuant, where the continuant is somehow involved in the process" assertion.
- has_part label "has part - holds between wholes and their parts (material entities or processes)" assertion.
- has_output label "has output - holds between a process and a continuant, where the continuant is an output of the process" assertion.
- has_nutrient label "has nutrient - one or more nutrients which are growth factors for a living organism" assertion.
- has_numeric_value label "has numeric value - connects a quantity value to a number" assertion.
- has_not_completed label "has not completed - holds between an entity and a process that the entity is capable of, but has not completed" assertion.
- has_molecular_consequence label "has molecular consequence - connects a sequence variant to a class describing the molecular consequence. E.g. SO:0001583" assertion.
- has_mode_of_inheritance label "has mode of inheritance - Relates a disease or phenotypic feature to its observed genetic segregation and assumed associated underlying DNA manifestation (i.e. autosomal, sex or mitochondrial chromosome)." assertion.
- has_metabolite label "has metabolite - holds between two molecular entities in which the second one is derived from the first one as a product of metabolism" assertion.
- has_member label "has member - Defines a mereological relation between a collection and an item." assertion.
- has_input label "has input - holds between a process and a continuant, where the continuant is an input into the process" assertion.
- has_gene_product label "has gene product - holds between a gene and a transcribed and/or translated product generated from it" assertion.
- has_gene_or_gene_product label "has gene or gene product - connects an entity with one or more gene or gene products" assertion.
- has_gene label "has gene - connects an entity associated with one or more genes" assertion.
- has_food_component label "has food component - holds between food and one or more chemical entities composing it, irrespective of nutritional value (i.e. could also be a contaminant or additive)" assertion.
- has_excipient label "has excipient - holds between a drug and a molecular entities in which the latter is a part of the former, and is a biologically inactive component" assertion.
- has_device label "has device - connects an entity to one or more (medical) devices" assertion.
- has_count label "has count - number of things with a particular property" assertion.
- has_constituent label "has constituent - one or more molecular entities within a chemical mixture" assertion.
- has_completed label "has completed - holds between an entity and a process that the entity is capable of and has completed" assertion.
- has_chemical_role label "has chemical role - A role is particular behaviour which a chemical entity may exhibit." assertion.