Matches in Nanopublications for { ?s ?p ?o <http://purl.org/np/RArAFrdM4rux7Cwl-lT_a4JzGk9tcGItbpd7ykkbD3S2M#assertion>. }
- disease_to_phenotypic_feature_association_subject label "disease to phenotypic feature association subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- disease_to_phenotypic_feature_association_object label "disease to phenotypic feature association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- disease_to_entity_association_mixin_subject label "disease to entity association mixin subject - disease class" assertion.
- disease_or_phenotypic_feature_to_location_association_object label "disease or phenotypic feature to location association object - anatomical entity in which the disease or feature is found." assertion.
- disease_or_phenotypic_feature_to_genetic_inheritance_association_predicate label "disease or phenotypic feature to genetic inheritance association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- disease_or_phenotypic_feature_to_genetic_inheritance_association_object label "disease or phenotypic feature to genetic inheritance association object - genetic inheritance associated with the specified disease or phenotypic feature." assertion.
- disease_or_phenotypic_feature_to_entity_association_mixin_subject label "disease or phenotypic feature to entity association mixin subject - disease or phenotype" assertion.
- disease_has_location label "disease has location - A relationship between a disease and an anatomical entity where the disease has one or more features that are located in that entity." assertion.
- disease_has_basis_in label "disease has basis in - A relation that holds between a disease and an entity where the state of the entity has contribution to the disease." assertion.
- directly_physically_interacts_with label "directly physically interacts with - A causal mechanism mediated by a direct contact between the effector and target entities (this contact may be weak or strong, transient or stable)." assertion.
- direction_qualifier label "direction qualifier - Composes with the core concept (+ aspect if provided) to describe a change in its direction or degree." assertion.
- diagnoses label "diagnoses - a relationship that identifies the nature of (an illness or other problem) by examination of the symptoms." assertion.
- derives_into label "derives into - holds between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity" assertion.
- derives_from label "derives from - holds between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity" assertion.
- derivative_qualifier label "derivative qualifier - A qualifier that composes with a core subject/object concept to describe something that is derived from the core concept. For example, the qualifier ‘metabolite’ combines with a ‘Chemical X’ core concept to express the composed concept ‘a metabolite of Chemical X’." assertion.
- decreases_response_to label "decreases response to - holds between two chemical entities where the action or effect of one decreases the susceptibility of a biological entity or system (e.g. an organism, cell, cellular component, macromolecular machine mixin, biological or pathological process) to the other" assertion.
- decreases_amount_or_activity_of label "decreases amount or activity of - A grouping mixin to help with searching for all the predicates that decrease the amount or activity of the object." assertion.
- decreased_likelihood_associated_with label "decreased likelihood associated with - " assertion.
- creation_date label "creation date - date on which an entity was created. This can be applied to nodes or edges" assertion.
- contributor_association_subject label "contributor association subject - information content entity which an agent has helped realise" assertion.
- contributor_association_qualifiers label "contributor association qualifiers - this field can be used to annotate special characteristics of an agent relationship, such as the fact that a given author agent of a publication is the 'corresponding author'" assertion.
- contributor_association_predicate label "contributor association predicate - generally one of the predicate values 'provider', 'publisher', 'editor' or 'author'" assertion.
- contributor_association_object label "contributor association object - agent helping to realise the given entity (e.g. such as a publication)" assertion.
- contributes_to label "contributes to - holds between two entities where the occurrence, existence, or activity of one causes or contributes to the occurrence or generation of the other" assertion.
- contraindicated_for label "contraindicated for - Holds between a drug and a disease or phenotype, such that a person with that disease should not be treated with the drug." assertion.
- context_qualifier label "context qualifier - Restricts the setting/context/location where the core concept (or qualified core concept) resides or occurs." assertion.
- condition_associated_with_gene label "condition associated with gene - holds between a gene and a disease or phenotypic feature that may be influenced, contribute to, or be correlated with the gene or its alleles/products" assertion.
- concept_pair_count label "concept pair count - The number of instances in a dataset/cohort whose records contain both the subject and object concept of an association." assertion.
- concept_count_subject label "concept count subject - The number of instances in a dataset/cohort whose records contain the concept in the subject slot of an association." assertion.
- concept_count_object label "concept count object - The number of instances in a dataset/cohort whose records contain the concept in the object slot of an association." assertion.
- composed_primarily_of label "composed primarily of - x composed_primarily_of_y if:more than half of the mass of x is made from parts of y." assertion.
- colocalizes_with label "colocalizes with - holds between two entities that are observed to be located in the same place." assertion.
- coexpressed_with label "coexpressed with - holds between any two genes or gene products, in which both are generally expressed within a single defined experimental context." assertion.
- coexists_with label "coexists with - holds between two entities that are co-located in the same aggregate object, process, or spatio-temporal region" assertion.
- close_match label "close match - a list of terms from different schemas or terminology systems that have a semantically similar but not strictly equivalent, broader, or narrower meaning. Such terms often describe the same general concept from different ontological perspectives (e.g. drug as a type of chemical entity versus drug as a type of role borne by a chemical entity)." assertion.
- clinical_modifier_qualifier label "clinical modifier qualifier - the method or process of administering a pharmaceutical compound to achieve a therapeutic effect in humans or animals." assertion.
- clinical_measurement_has_attribute_type label "clinical measurement has attribute type - connects an attribute to a class that describes it" assertion.
- clinical_finding_has_attribute label "clinical finding has attribute - connects any entity to an attribute" assertion.
- chi_squared_statistic label "chi squared statistic - represents the chi-squared statistic computed from observations" assertion.
- chemically_similar_to label "chemically similar to - holds between one small molecule entity and another that it approximates for purposes of scientific study, in virtue of its exhibiting similar features of the studied entity." assertion.
- chemical_to_pathway_association_subject label "chemical to pathway association subject - the chemical entity that is affecting the pathway" assertion.
- chemical_to_pathway_association_object label "chemical to pathway association object - the pathway that is affected by the chemical" assertion.
- chemical_to_entity_association_mixin_subject label "chemical to entity association mixin subject - the chemical entity or entity that is an interactor" assertion.
- chemical_to_disease_or_phenotypic_feature_association_object label "chemical to disease or phenotypic feature association object - the disease or phenotype that is affected by the chemical" assertion.
- chemical_to_chemical_derivation_association_subject label "chemical to chemical derivation association subject - the upstream chemical entity" assertion.
- chemical_to_chemical_derivation_association_predicate label "chemical to chemical derivation association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- chemical_to_chemical_derivation_association_object label "chemical to chemical derivation association object - the downstream chemical entity" assertion.
- chemical_to_chemical_derivation_association_catalyst_qualifier label "chemical to chemical derivation association catalyst qualifier - this connects the derivation edge to the chemical entity that catalyzes the reaction that causes the subject chemical to transform into the object chemical." assertion.
- chemical_to_chemical_association_object label "chemical to chemical association object - the chemical element that is the target of the statement" assertion.
- chemical_role_mixin label "chemical role mixin - A role played by the chemical entity or part thereof within a chemical context." assertion.
- chemical_or_drug_or_treatment_to_disease_or_phenotypic_feature_association_predicate label "chemical or drug or treatment to disease or phenotypic feature association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- chemical_or_drug_or_treatment_side_effect_disease_or_phenotypic_feature_association_predicate label "chemical or drug or treatment side effect disease or phenotypic feature association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- chemical_gene_interaction_association_subject label "chemical gene interaction association subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- chemical_gene_interaction_association_predicate label "chemical gene interaction association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- chemical_gene_interaction_association_object label "chemical gene interaction association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- chemical_gene_interaction_association_anatomical_context_qualifier label "chemical gene interaction association anatomical context qualifier - A statement qualifier representing an anatomical location where an relationship expressed in an association took place (can be a tissue, cell type, or sub-cellular location)." assertion.
- chemical_entity_to_entity_association_mixin_subject label "chemical entity to entity association mixin subject - the chemical entity that is an interactor" assertion.
- chemical_entity_or_gene_or_gene_product_regulates_gene_association_subject label "chemical entity or gene or gene product regulates gene association subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- chemical_entity_or_gene_or_gene_product_regulates_gene_association_predicate label "chemical entity or gene or gene product regulates gene association predicate - the direction is always from regulator to regulated" assertion.
- chemical_entity_or_gene_or_gene_product_regulates_gene_association_object label "chemical entity or gene or gene product regulates gene association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- chemical_entity_assesses_named_thing_association_subject label "chemical entity assesses named thing association subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- chemical_entity_assesses_named_thing_association_predicate label "chemical entity assesses named thing association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- chemical_entity_assesses_named_thing_association_object label "chemical entity assesses named thing association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- chemical_affects_gene_association_subject label "chemical affects gene association subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- chemical_affects_gene_association_species_context_qualifier label "chemical affects gene association species context qualifier - A statement qualifier representing a taxonomic category of species in which a relationship expressed in an association took place." assertion.
- chemical_affects_gene_association_qualified_predicate label "chemical affects gene association qualified predicate - Predicate to be used in an association when subject and object qualifiers are present and the full reading of the statement requires a qualification to the predicate in use in order to refine or increase the specificity of the full statement reading. This qualifier holds a relationship to be used instead of that expressed by the primary predicate, in a ‘full statement’ reading of the association, where qualifier-based semantics are included. This is necessary only in cases where the primary predicate does not work in a full statement reading." assertion.
- chemical_affects_gene_association_predicate label "chemical affects gene association predicate - A high-level grouping for the relationship type. AKA minimal predicate. This is analogous to category for nodes." assertion.
- chemical_affects_gene_association_object label "chemical affects gene association object - connects an association to the object of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- chemical_affects_gene_association_causal_mechanism_qualifier label "chemical affects gene association causal mechanism qualifier - A statement qualifier representing a type of molecular control mechanism through which an effect of a chemical on a gene or gene product is mediated (e.g. 'agonism', 'inhibition', 'allosteric modulation', 'channel blocker')" assertion.
- chemical_affects_gene_association_anatomical_context_qualifier label "chemical affects gene association anatomical context qualifier - A statement qualifier representing an anatomical location where an relationship expressed in an association took place (can be a tissue, cell type, or sub-cellular location)." assertion.
- chapter label "chapter - chapter of a book" assertion.
- cell_line_to_entity_association_mixin_subject label "cell line to entity association mixin subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- cell_line_to_disease_or_phenotypic_feature_association_subject label "cell line to disease or phenotypic feature association subject - connects an association to the subject of the association. For example, in a gene-to-phenotype association, the gene is subject and phenotype is object." assertion.
- cell_line_as_a_model_of_disease_association_subject label "cell line as a model of disease association subject - A cell line derived from an organismal entity with a disease state that is used as a model of that disease." assertion.
- causes label "causes - holds between two entities where the occurrence, existence, or activity of one causes the occurrence or generation of the other" assertion.
- caused_by label "caused by - holds between two entities where the occurrence, existence, or activity of one is caused by the occurrence or generation of the other" assertion.
- causal_mechanism_qualifier label "causal mechanism qualifier - A statement qualifier representing a type of molecular control mechanism through which an effect of a chemical on a gene or gene product is mediated (e.g. 'agonism', 'inhibition', 'allosteric modulation', 'channel blocker')" assertion.
- catalyst_qualifier label "catalyst qualifier - a qualifier that connects an association between two causally connected entities (for example, two chemical entities, or a chemical entity in that changes location) and the gene product, gene, or complex that enables or catalyzes the change." assertion.
- case_to_entity_association_mixin_subject label "case to entity association mixin subject - the case (e.g. patient) that has the property" assertion.
- capable_of label "capable of - holds between a physical entity and process or function, where the continuant alone has the ability to carry out the process or function." assertion.
- broad_matches label "broad matches - A list of terms from different schemas or terminology systems that have a broader meaning. Such terms often describe a more general concept from different ontological perspectives." assertion.
- broad_match label "broad match - a list of terms from different schemas or terminology systems that have a broader, more general meaning. Broader terms are typically shown as parents in a hierarchy or tree." assertion.
- book_type label "book type - Should generally be set to an ontology class defined term for 'book'." assertion.
- book_id label "book id - Books should have industry-standard identifier such as from ISBN." assertion.
- book_chapter_published_in label "book chapter published in - The enclosing parent book containing the chapter should have industry-standard identifier from ISBN." assertion.
- bonferonni_adjusted_p_value label "bonferonni adjusted p value - The Bonferroni correction is an adjustment made to P values when several dependent or independent statistical tests are being performed simultaneously on a single data set. To perform a Bonferroni correction, divide the critical P value (α) by the number of comparisons being made. P is always italicized and capitalized. The actual P value* should be expressed (P=. 04) rather than expressing a statement of inequality (P<. 05), unless P<." assertion.
- biomarker_for label "biomarker for - holds between a measurable chemical entity and a disease or phenotypic feature, where the entity is used as an indicator of the presence or state of the disease or feature." assertion.
- biological_role_mixin label "biological role mixin - A role played by the chemical entity or part thereof within a biological context." assertion.
- binds label "binds - A causal mechanism mediated by the direct contact between effector and target chemical or biomolecular entity, which form a stable physical interaction." assertion.
- behavior_to_behavioral_feature_association_subject label "behavior to behavioral feature association subject - behavior that is the subject of the association" assertion.
- behavior_to_behavioral_feature_association_object label "behavior to behavioral feature association object - behavioral feature that is the object of the association" assertion.
- base_coordinate label "base coordinate - A position in the base coordinate system. Base coordinates start at position 1 instead of position 0." assertion.
- available_from label "available from - " assertion.
- authors label "authors - connects an publication to the list of authors who contributed to the publication. This property should be a comma-delimited list of author names. It is recommended that an author's name be formatted as "surname, firstname initial.". Note that this property is a node annotation expressing the citation list of authorship which might typically otherwise be more completely documented in biolink:PublicationToProviderAssociation defined edges which point to full details about an author and possibly, some qualifiers which clarify the specific status of a given author in the publication." assertion.
- author label "author - an instance of one (co-)creator primarily responsible for a written work" assertion.
- attribute_name label "attribute name - The human-readable 'attribute name' can be set to a string which reflects its context of interpretation, e.g. SEPIO evidence/provenance/confidence annotation or it can default to the name associated with the 'has attribute type' slot ontology term." assertion.
- association_slot label "association slot - any slot that relates an association to another entity" assertion.
- association_category label "association category - Name of the high level ontology class in which this entity is categorized. Corresponds to the label for the biolink entity type class. * In a neo4j database this MAY correspond to the neo4j label tag. * In an RDF database it should be a biolink model class URI. This field is multi-valued. It should include values for ancestors of the biolink class; for example, a protein such as Shh would have category values `biolink:Protein`, `biolink:GeneProduct`, `biolink:MolecularEntity`, ... In an RDF database, nodes will typically have an rdf:type triples. This can be to the most specific biolink class, or potentially to a class more specific than something in biolink. For example, a sequence feature `f` may have a rdf:type assertion to a SO class such as TF_binding_site, which is more specific than anything in biolink. Here we would have categories {biolink:GenomicEntity, biolink:MolecularEntity, biolink:NamedThing}" assertion.
- associated_with_sensitivity_to label "associated with sensitivity to - A relation that holds between a named thing and a chemical that specifies that the change in the named thing is found to be associated with the degree of sensitivity to treatment by the chemical." assertion.
- associated_with_resistance_to label "associated with resistance to - A relation that holds between a named thing and a chemical that specifies that the change in the named thing is found to be associated with the degree of resistance to treatment by the chemical." assertion.